Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm27801-201ENSMUST00000184174 223 ntBASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav21-dv12A0A075B6C4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm26833-201ENSMUST00000180899 440 ntBASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm43017-201ENSMUST00000198296 752 ntBASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav21-dv12A0A075B6C4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav21-dv12A0A075B6C4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav21-dv12A0A075B6C4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm7860-201ENSMUST00000121190 879 ntBASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav21-dv12A0A075B6C4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms