Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm11421-201ENSMUST00000122124 294 ntBASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-7A0A075B6B0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Trav6d-7A0A075B6B0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Rarb-207ENSMUST00000225921 2756 ntBASIC14.39□□□□□ -0.11
Trav6d-7A0A075B6B0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-7A0A075B6B0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-7A0A075B6B0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-7A0A075B6B0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms