Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12d-3A0A075B6A4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav12d-3A0A075B6A4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12d-3A0A075B6A4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12d-3A0A075B6A4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-3A0A075B6A4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-3A0A075B6A4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-3A0A075B6A4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-3A0A075B6A4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms