Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm38205-201ENSMUST00000192243 258 ntBASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6-7-dv9A0A075B639 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6-7-dv9A0A075B639 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-7-dv9A0A075B639 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-7-dv9A0A075B639 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms