Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16nA0A075B634 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav16nA0A075B634 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav16nA0A075B634 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16nA0A075B634 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.1□□□□□ -0.15
Trav16nA0A075B634 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16nA0A075B634 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Gm15820-201ENSMUST00000201566 728 ntBASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16nA0A075B634 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms