Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-5A0A075B621 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-5A0A075B621 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Gm11175-201ENSMUST00000116172 543 ntBASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.47□□□□□ -0.09
Trav6n-5A0A075B621 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-5A0A075B621 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-5A0A075B621 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav6n-5A0A075B621 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Gm8969-201ENSMUST00000199694 526 ntBASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms