Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav5-1A0A075B5Z7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav5-1A0A075B5Z7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav5-1A0A075B5Z7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav5-1A0A075B5Z7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.02■□□□□ 0.16
Trav5-1A0A075B5Z7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-1A0A075B5Z7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-1A0A075B5Z7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.02■□□□□ 0.15
Trav5-1A0A075B5Z7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-1A0A075B5Z7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-1A0A075B5Z7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms