Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm46339-201ENSMUST00000222720 3539 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Dalir-201ENSMUST00000188773 2170 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm12599-201ENSMUST00000120534 792 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm11838-201ENSMUST00000121999 231 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm12967-201ENSMUST00000122147 289 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm1947-201ENSMUST00000122451 910 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm8167-201ENSMUST00000183320 958 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm9118-201ENSMUST00000219246 754 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Upk3aQ9JKX8 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.2
Upk3aQ9JKX8 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Upk3aQ9JKX8 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Upk3aQ9JKX8 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.59□□□□□ -1.2
Upk3aQ9JKX8 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.59□□□□□ -1.2
Upk3aQ9JKX8 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm13680-201ENSMUST00000119790 793 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm15836-201ENSMUST00000119952 793 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm12402-201ENSMUST00000120536 334 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm25845-201ENSMUST00000122588 310 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm22562-201ENSMUST00000157334 111 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 Gm26197-201ENSMUST00000175033 115 ntBASIC7.58□□□□□ -1.2
Upk3aQ9JKX8 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms