Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Ighv1-38-201ENSMUST00000192755 349 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm43884-201ENSMUST00000204251 559 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm5609-201ENSMUST00000210008 1267 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm1943-201ENSMUST00000211890 174 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 AC111046.1-201ENSMUST00000217715 412 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm4739-201ENSMUST00000218296 633 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm9305-201ENSMUST00000220962 599 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm46342-201ENSMUST00000223411 602 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 CT030646.1-201ENSMUST00000225049 980 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 CT009515.1-201ENSMUST00000228127 586 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Olfr1255-201ENSMUST00000057369 933 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm25799-201ENSMUST00000082643 107 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm7493-201ENSMUST00000085919 626 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm10619-202ENSMUST00000186073 3287 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Nbr1-205ENSMUST00000107212 4168 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clcn1Q64347 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm9597-202ENSMUST00000227632 1387 ntBASIC10.87□□□□□ -0.67
Clcn1Q64347 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcn1Q64347 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm14855-201ENSMUST00000119925 192 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm11901-201ENSMUST00000120412 437 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm26424-201ENSMUST00000122530 104 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC10.86□□□□□ -0.67
Clcn1Q64347 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm42525-201ENSMUST00000196257 527 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC10.86□□□□□ -0.67
Clcn1Q64347 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm4860-201ENSMUST00000200368 454 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 AC154198.1-201ENSMUST00000222839 424 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 AC133189.3-201ENSMUST00000226269 878 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm6807-201ENSMUST00000077435 888 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Clcn1Q64347 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm37842-201ENSMUST00000192330 1569 ntBASIC10.86□□□□□ -0.67
Clcn1Q64347 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Clcn1Q64347 Gm18259-201ENSMUST00000220991 2010 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Sun1-206ENSMUST00000110884 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm10307-201ENSMUST00000189839 1337 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm45360-201ENSMUST00000210698 1405 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 AC121942.3-201ENSMUST00000225768 1436 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm43376-201ENSMUST00000198939 1887 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 Tango2-201ENSMUST00000115628 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcn1Q64347 CT009550.4-202ENSMUST00000227369 3076 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm8728-201ENSMUST00000207367 2178 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm8486-201ENSMUST00000207508 2171 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm8685-201ENSMUST00000207567 2183 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 Gm16443-201ENSMUST00000207909 2184 ntBASIC10.85□□□□□ -0.67
Clcn1Q64347 AC153526.3-201ENSMUST00000220145 2183 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms