Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm39041-201ENSMUST00000205557 3902 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Gm43158-201ENSMUST00000198484 1555 ntBASIC9.46□□□□□ -0.9
Vps54Q5SPW0 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm6823-201ENSMUST00000120791 1839 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm12365-201ENSMUST00000117931 568 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm42965-201ENSMUST00000201254 250 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm44561-201ENSMUST00000208869 264 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm45074-201ENSMUST00000209091 1240 ntBASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps54Q5SPW0 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm13742-201ENSMUST00000118805 457 ntBASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm12773-201ENSMUST00000120134 587 ntBASIC9.44□□□□□ -0.9
Vps54Q5SPW0 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Mir7029-201ENSMUST00000184777 61 ntBASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm18207-201ENSMUST00000205486 526 ntBASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm5586-201ENSMUST00000206264 795 ntBASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps54Q5SPW0 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms