Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm11763-201ENSMUST00000119964 312 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm25780-201ENSMUST00000122528 253 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Ang-ps1-201ENSMUST00000162314 436 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm16184-201ENSMUST00000162324 573 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm8868-201ENSMUST00000173591 577 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm27435-201ENSMUST00000183588 88 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm42464-201ENSMUST00000196717 417 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm5857-201ENSMUST00000198953 493 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm34701-201ENSMUST00000204213 849 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm45401-201ENSMUST00000209456 733 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm10155-201ENSMUST00000084598 483 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim43aQ3TL54 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm43322-201ENSMUST00000196232 1612 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm23533-201ENSMUST00000157540 245 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm24004-201ENSMUST00000158460 178 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Gm7482-201ENSMUST00000206446 505 ntBASIC8.37□□□□□ -1.07
Trim43aQ3TL54 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms