Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir680-1-201ENSMUST00000102257 109 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Sox1P53783 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Sox1P53783 Gm7821-201ENSMUST00000117111 788 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm14480-201ENSMUST00000118521 433 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm16016-201ENSMUST00000120831 550 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm22818-201ENSMUST00000157446 104 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm8550-201ENSMUST00000161621 653 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm17164-201ENSMUST00000169013 506 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Gm5268-201ENSMUST00000189212 940 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm38330-201ENSMUST00000192743 959 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm38333-201ENSMUST00000193608 604 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Sox1P53783 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC8.55□□□□□ -1.04
Sox1P53783 Gm19073-201ENSMUST00000219978 555 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.55□□□□□ -1.04
Sox1P53783 AC154562.1-201ENSMUST00000226140 966 ntBASIC8.55□□□□□ -1.04
Sox1P53783 AC163664.1-201ENSMUST00000226251 1248 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Sox1P53783 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Sox1P53783 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Sox1P53783 Mir350-201ENSMUST00000083639 99 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Sox1P53783 Tango6-201ENSMUST00000048359 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Spdl1-201ENSMUST00000093191 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm17322-201ENSMUST00000181289 2169 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Pld1-203ENSMUST00000123539 3732 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Sec14l3-201ENSMUST00000068322 2686 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Suv39h1-202ENSMUST00000115637 2778 ntTSL 2 BASIC8.55□□□□□ -1.04
Sox1P53783 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC8.54□□□□□ -1.04
Sox1P53783 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Cabyr-206ENSMUST00000186263 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Olfr92-203ENSMUST00000216341 2115 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Dad1-202ENSMUST00000128231 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 A230056P14Rik-201ENSMUST00000130189 2177 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Gm38110-201ENSMUST00000194594 1551 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sox1P53783 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Sox1P53783 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Sox1P53783 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Sox1P53783 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC8.54□□□□□ -1.04
Sox1P53783 Gm12401-201ENSMUST00000118435 228 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm12741-201ENSMUST00000118836 556 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm3931-201ENSMUST00000119038 455 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm11809-201ENSMUST00000120923 950 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC8.54□□□□□ -1.04
Sox1P53783 Gm22817-201ENSMUST00000157448 356 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm25342-201ENSMUST00000157459 122 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm22530-201ENSMUST00000158820 118 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Sox1P53783 Gm37337-201ENSMUST00000192601 993 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.54□□□□□ -1.04
Sox1P53783 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms