Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm18259-201ENSMUST00000220991 2010 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Dgkh-206ENSMUST00000228362 3308 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm5406-201ENSMUST00000120054 766 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Mir1968-201ENSMUST00000157429 68 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm22847-201ENSMUST00000157707 105 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm20452-201ENSMUST00000174686 513 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm26505-201ENSMUST00000176208 166 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm26269-201ENSMUST00000180144 126 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm36961-201ENSMUST00000191980 132 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm36996-201ENSMUST00000194466 250 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm43287-201ENSMUST00000197747 600 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm45454-201ENSMUST00000211484 455 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Rpl32l-201ENSMUST00000216127 399 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Gm39041-201ENSMUST00000205557 3902 ntBASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Upk3aQ9JKX8 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm8974-201ENSMUST00000175770 479 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm6100-201ENSMUST00000180253 403 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Gm10805-201ENSMUST00000099710 399 ntBASIC7.6□□□□□ -1.19
Upk3aQ9JKX8 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms