Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm43800-201ENSMUST00000201868 2731 ntBASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm37995-201ENSMUST00000194958 1714 ntBASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Gm43161-201ENSMUST00000197020 1688 ntBASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chmp4bQ9D8B3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Mir705-201ENSMUST00000102058 82 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm23192-201ENSMUST00000102434 96 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm14056-201ENSMUST00000117198 642 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm27435-201ENSMUST00000183588 88 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm8010-201ENSMUST00000194128 873 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm44561-201ENSMUST00000208869 264 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 AC132587.1-201ENSMUST00000220562 166 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 AC123738.1-201ENSMUST00000224796 773 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Gm43430-201ENSMUST00000196513 3897 ntBASIC10.05□□□□□ -0.8
Chmp4bQ9D8B3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 n-R5s1-201ENSMUST00000101925 119 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm12460-201ENSMUST00000117147 357 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm12692-201ENSMUST00000121092 546 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm4908-201ENSMUST00000121923 1005 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 CT009713.5-201ENSMUST00000224508 909 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 CT009733.1-202ENSMUST00000224941 441 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 AC122877.1-201ENSMUST00000228873 218 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Gm25129-201ENSMUST00000082651 133 ntBASIC10.04□□□□□ -0.8
Chmp4bQ9D8B3 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms