Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 CT009556.2-201ENSMUST00000227980 1123 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm4825-201ENSMUST00000079690 408 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm10155-201ENSMUST00000084598 483 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm5614-201ENSMUST00000091097 318 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Clrn1Q8K445 Gm44013-201ENSMUST00000204392 2262 ntBASIC7.61□□□□□ -1.19
Clrn1Q8K445 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 AC132384.4-201ENSMUST00000220343 1397 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm26344-201ENSMUST00000104553 132 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm24380-201ENSMUST00000122696 324 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm26048-201ENSMUST00000157305 142 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm17068-201ENSMUST00000163135 980 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm18043-201ENSMUST00000216741 739 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 AC122539.2-201ENSMUST00000220207 404 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 AC166822.2-201ENSMUST00000228746 275 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm37121-201ENSMUST00000192219 2556 ntBASIC7.6□□□□□ -1.19
Clrn1Q8K445 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clrn1Q8K445 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Gm42981-201ENSMUST00000200184 3252 ntBASIC7.59□□□□□ -1.19
Clrn1Q8K445 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Clrn1Q8K445 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms