Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm28281-201ENSMUST00000185658 187 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm17530-201ENSMUST00000194336 472 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm2734-201ENSMUST00000208561 743 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 AC154528.3-201ENSMUST00000228011 679 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.9□□□□□ -0.99
Ccdc38Q8CDN8 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm13456-201ENSMUST00000118928 1365 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm13254-201ENSMUST00000118295 654 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm17995-201ENSMUST00000209266 530 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm9118-201ENSMUST00000219246 754 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm6083-201ENSMUST00000075518 357 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Snora57-201ENSMUST00000093658 148 ntBASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ccdc38Q8CDN8 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm12460-201ENSMUST00000117147 357 ntBASIC8.88□□□□□ -0.99
Ccdc38Q8CDN8 Gm11241-201ENSMUST00000117371 896 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms