Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 AC131743.4-201ENSMUST00000221638 1553 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm25761-201ENSMUST00000103983 128 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm5839-201ENSMUST00000182835 1007 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Mir7058-201ENSMUST00000184637 75 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 AC137678.1-201ENSMUST00000198370 118 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 AC137950.1-201ENSMUST00000228553 515 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm39041-201ENSMUST00000205557 3902 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 AC164437.4-204ENSMUST00000227169 4024 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm6819-201ENSMUST00000185325 1891 ntBASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm15576-201ENSMUST00000117806 583 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm7910-201ENSMUST00000117896 835 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm5761-201ENSMUST00000119238 834 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm15079-201ENSMUST00000121943 216 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm24130-201ENSMUST00000158536 151 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm7191-201ENSMUST00000182678 990 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm38226-201ENSMUST00000192207 521 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm45674-201ENSMUST00000210043 450 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm14267-208ENSMUST00000228324 1189 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Olfr890-201ENSMUST00000079804 945 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Malat1-201ENSMUST00000172812 6983 ntBASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps53Q8CCB4 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Mir3085-201ENSMUST00000175493 89 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Snhg7-201ENSMUST00000181621 139 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm5350-201ENSMUST00000182057 1002 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm28530-201ENSMUST00000190473 577 ntBASIC9.32□□□□□ -0.92
Vps53Q8CCB4 Gm37481-201ENSMUST00000195176 403 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms