Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 Gm14631-201ENSMUST00000119067 594 ntBASIC12.02□□□□□ -0.48
Cux1P53564 Gm11371-201ENSMUST00000120294 385 ntBASIC12.02□□□□□ -0.48
Cux1P53564 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC12.02□□□□□ -0.48
Cux1P53564 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.02□□□□□ -0.48
Cux1P53564 Gm38030-201ENSMUST00000192376 475 ntBASIC12.02□□□□□ -0.48
Cux1P53564 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC12.02□□□□□ -0.48
Cux1P53564 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.02□□□□□ -0.48
Cux1P53564 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC12.02□□□□□ -0.48
Cux1P53564 CT010480.3-201ENSMUST00000224712 259 ntBASIC12.02□□□□□ -0.48
Cux1P53564 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cux1P53564 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cux1P53564 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cux1P53564 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cux1P53564 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cux1P53564 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cux1P53564 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cux1P53564 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC12.02□□□□□ -0.49
Cux1P53564 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cux1P53564 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm12024-201ENSMUST00000118819 1253 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm14824-201ENSMUST00000119421 737 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm15153-201ENSMUST00000119867 274 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Gm27684-201ENSMUST00000183778 80 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm9114-201ENSMUST00000188558 997 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Gm44590-201ENSMUST00000206161 391 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm45100-201ENSMUST00000209153 391 ntBASIC12.01□□□□□ -0.49
Cux1P53564 AC154849.2-201ENSMUST00000223781 974 ntBASIC12.01□□□□□ -0.49
Cux1P53564 AC122459.3-201ENSMUST00000228508 1042 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cux1P53564 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm10123-201ENSMUST00000075723 490 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Gm11342-203ENSMUST00000224879 1324 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC12.01□□□□□ -0.49
Cux1P53564 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm16072-201ENSMUST00000119574 2377 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Gm4849-201ENSMUST00000188428 2246 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm37649-201ENSMUST00000192079 2232 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm11880-201ENSMUST00000117612 399 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm15105-201ENSMUST00000117777 204 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm15481-201ENSMUST00000120264 539 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm23762-201ENSMUST00000158348 106 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm26505-201ENSMUST00000176208 166 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cux1P53564 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Gm9419-201ENSMUST00000200672 567 ntBASIC12.01□□□□□ -0.49
Cux1P53564 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC12.01□□□□□ -0.49
Cux1P53564 AC154382.1-201ENSMUST00000220958 1282 ntBASIC12.01□□□□□ -0.49
Cux1P53564 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC12.01□□□□□ -0.49
Cux1P53564 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cux1P53564 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cux1P53564 Gm6368-201ENSMUST00000119727 2147 ntBASIC12□□□□□ -0.49
Cux1P53564 Gm45634-201ENSMUST00000209736 1990 ntBASIC12□□□□□ -0.49
Cux1P53564 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cux1P53564 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cux1P53564 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cux1P53564 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cux1P53564 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cux1P53564 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cux1P53564 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cux1P53564 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms