Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm13444-201ENSMUST00000119445 522 ntBASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm21839-201ENSMUST00000179536 378 ntBASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Ighv8-15-201ENSMUST00000197770 294 ntBASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm42424-201ENSMUST00000198319 376 ntBASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Olfr471-201ENSMUST00000210091 936 ntBASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ccdc180J3QNE4 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 AC153955.4-201ENSMUST00000217069 2752 ntBASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Gm42883-201ENSMUST00000202594 222 ntBASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Gm44112-201ENSMUST00000204787 372 ntBASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 AC115735.5-201ENSMUST00000228386 397 ntBASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc180J3QNE4 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 AC155270.1-201ENSMUST00000221626 4028 ntBASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Gm44192-201ENSMUST00000204195 556 ntBASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc180J3QNE4 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm12601-201ENSMUST00000118994 846 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm5283-201ENSMUST00000177874 334 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm43928-201ENSMUST00000203737 409 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm45198-201ENSMUST00000206796 591 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 AC115746.1-201ENSMUST00000228949 3617 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm43776-201ENSMUST00000199729 2914 ntBASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc180J3QNE4 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gm15192-201ENSMUST00000121005 293 ntBASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Mir7212-201ENSMUST00000184098 61 ntBASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Mir6987-201ENSMUST00000184789 73 ntBASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 AC102676.1-201ENSMUST00000228131 719 ntBASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc180J3QNE4 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms