Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 CT030170.6-202ENSMUST00000223186 544 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 AC154747.4-202ENSMUST00000223826 852 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm46339-201ENSMUST00000222720 3539 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm37121-201ENSMUST00000192219 2556 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm4918-201ENSMUST00000119420 1084 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm23533-201ENSMUST00000157540 245 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm25437-201ENSMUST00000158282 132 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm5839-201ENSMUST00000182835 1007 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm8529-201ENSMUST00000183298 745 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm28980-201ENSMUST00000187877 219 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm37339-201ENSMUST00000194142 392 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm40319-201ENSMUST00000199785 481 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm4977-201ENSMUST00000215709 1262 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm19161-201ENSMUST00000217958 737 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm7239-201ENSMUST00000220981 860 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.49□□□□□ -0.89
Vps54Q5SPW0 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm13255-201ENSMUST00000117255 547 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm17129-201ENSMUST00000168168 505 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm44245-201ENSMUST00000204304 232 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Vps54Q5SPW0 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms