Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm14513-201ENSMUST00000117403 123 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm15778-201ENSMUST00000118469 608 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm12517-201ENSMUST00000122082 425 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm21181-201ENSMUST00000186249 330 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm6472-202ENSMUST00000187973 582 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm29383-201ENSMUST00000188284 480 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm7972-201ENSMUST00000208434 1137 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 AC151904.5-201ENSMUST00000218975 549 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm29807-201ENSMUST00000220161 372 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 AC238940.2-201ENSMUST00000224202 330 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Gm42847-201ENSMUST00000201732 2553 ntBASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 C1ra-201ENSMUST00000068593 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b2Q3UJB0 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm38014-201ENSMUST00000193349 2612 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm11799-201ENSMUST00000116110 460 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm14099-201ENSMUST00000117769 605 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm13552-201ENSMUST00000118837 417 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm29362-201ENSMUST00000187898 133 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm18875-201ENSMUST00000188563 882 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm44279-201ENSMUST00000205154 472 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm4259-201ENSMUST00000206489 758 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm45198-201ENSMUST00000206796 591 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm45299-201ENSMUST00000210199 420 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm17910-201ENSMUST00000211038 838 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm4247-201ENSMUST00000211441 1042 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Gm19238-201ENSMUST00000221936 1260 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 AC165281.1-201ENSMUST00000225713 1011 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 AC099629.1-201ENSMUST00000226778 464 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 n-R5s41-201ENSMUST00000083025 119 ntBASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Ces2c-201ENSMUST00000055052 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b2Q3UJB0 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms