Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Duxbl3-202ENSMUST00000112340 2248 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Duxbl2-202ENSMUST00000172038 2248 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Pcdhb5-201ENSMUST00000078271 3535 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Efcab1-201ENSMUST00000090277 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC8.57□□□□□ -1.04
Sox1P53783 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 C1ra-201ENSMUST00000068593 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Caps2-203ENSMUST00000170013 2321 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Supt7l-202ENSMUST00000200721 1657 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Orai2-202ENSMUST00000196454 3990 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Ablim1-205ENSMUST00000111526 2164 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Sox1P53783 Tpt1-ps2-201ENSMUST00000120548 521 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm6483-201ENSMUST00000155660 862 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm4835-201ENSMUST00000155839 972 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm24155-201ENSMUST00000175259 110 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Calm5-201ENSMUST00000183198 589 ntBASIC8.57□□□□□ -1.04
Sox1P53783 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm8596-201ENSMUST00000188004 792 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm37191-201ENSMUST00000193346 388 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.57□□□□□ -1.04
Sox1P53783 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sox1P53783 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm4898-201ENSMUST00000218519 832 ntBASIC8.57□□□□□ -1.04
Sox1P53783 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.57□□□□□ -1.04
Sox1P53783 AC131117.2-203ENSMUST00000225886 950 ntBASIC8.57□□□□□ -1.04
Sox1P53783 AC121542.1-201ENSMUST00000227245 721 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Mir455-201ENSMUST00000093594 82 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sox1P53783 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Gm10780-201ENSMUST00000099459 285 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Ddr2-201ENSMUST00000027985 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sox1P53783 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 AC154461.2-201ENSMUST00000225462 1980 ntBASIC8.57□□□□□ -1.04
Sox1P53783 AC165260.6-201ENSMUST00000225447 1735 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.57□□□□□ -1.04
Sox1P53783 Ighe-202ENSMUST00000223335 1460 ntAPPRIS P5 BASIC8.57□□□□□ -1.04
Sox1P53783 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sox1P53783 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Sox1P53783 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Mageb7-ps-201ENSMUST00000118274 1041 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm14489-201ENSMUST00000120868 901 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms