Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Prpf8Q99PV0 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Prpf8Q99PV0 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm14186-201ENSMUST00000120804 137 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm5181-201ENSMUST00000183140 971 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm8167-201ENSMUST00000183320 958 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Mir6999-201ENSMUST00000183498 61 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm5147-201ENSMUST00000185999 794 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm43012-201ENSMUST00000198569 937 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Mir455-201ENSMUST00000093594 82 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm7882-201ENSMUST00000177915 1762 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm24472-201ENSMUST00000104484 132 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm16297-201ENSMUST00000161466 459 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm4605-201ENSMUST00000203148 625 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Mir135b-201ENSMUST00000083501 97 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Aldoart1-201ENSMUST00000078617 2052 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 AC117656.3-203ENSMUST00000225007 1809 ntBASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Prpf8Q99PV0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 AC165260.6-201ENSMUST00000225447 1735 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm23706-201ENSMUST00000104369 82 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm13163-201ENSMUST00000119875 336 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm22035-201ENSMUST00000157284 228 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm19810-201ENSMUST00000218521 251 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Prpf8Q99PV0 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms