Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm38130-201ENSMUST00000194311 1761 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm18828-201ENSMUST00000180475 857 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Mif-ps7-201ENSMUST00000223357 327 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm1982-201ENSMUST00000188615 1887 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm38110-201ENSMUST00000194594 1551 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm15586-201ENSMUST00000121218 528 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm18709-201ENSMUST00000180564 489 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm37282-201ENSMUST00000191987 164 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm37665-201ENSMUST00000192353 149 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm43835-201ENSMUST00000195932 149 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm42525-201ENSMUST00000196257 527 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm17835-201ENSMUST00000196870 499 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm43535-201ENSMUST00000197846 164 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm44379-201ENSMUST00000204501 164 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm44268-201ENSMUST00000204814 164 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm38430-201ENSMUST00000209888 1240 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 AC159263.2-201ENSMUST00000221593 411 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm5789-201ENSMUST00000222643 865 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Gm18619-201ENSMUST00000222722 1147 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 AC123058.1-201ENSMUST00000223748 437 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 AC132474.1-201ENSMUST00000214407 3686 ntBASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Vps53Q8CCB4 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms