Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm45251-201ENSMUST00000209486 1465 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm42700-201ENSMUST00000199071 2437 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 AC164437.4-204ENSMUST00000227169 4024 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm24334-201ENSMUST00000104210 128 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm25372-201ENSMUST00000158161 255 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm16103-201ENSMUST00000163003 1279 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Mir6919-201ENSMUST00000185146 62 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm6799-201ENSMUST00000186919 573 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm28980-201ENSMUST00000187877 219 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm34701-201ENSMUST00000204213 849 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm30196-201ENSMUST00000208957 160 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm7239-201ENSMUST00000220981 860 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Olfr120-201ENSMUST00000077498 993 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm24143-201ENSMUST00000082633 145 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Phf7-206ENSMUST00000228437 1373 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm42576-201ENSMUST00000202336 2846 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccdc60Q8C4J0 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm37956-201ENSMUST00000195208 2010 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm14032-201ENSMUST00000117686 1026 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm12599-201ENSMUST00000120534 792 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm5931-201ENSMUST00000121308 477 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm18060-201ENSMUST00000207407 564 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm33096-201ENSMUST00000210189 493 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 AC133189.3-201ENSMUST00000226269 878 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 AC107452.2-201ENSMUST00000228415 363 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 AC122426.1-201ENSMUST00000214736 2235 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Ephx2-202ENSMUST00000224698 1985 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Gm37066-201ENSMUST00000192713 2061 ntBASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Ccdc60Q8C4J0 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms