Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37962-201ENSMUST00000195535 2034 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Peg13-201ENSMUST00000202826 4725 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm44001-201ENSMUST00000203158 3773 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm11558-201ENSMUST00000118454 459 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm22915-201ENSMUST00000157615 136 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm23117-201ENSMUST00000158482 108 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 AC162176.1-201ENSMUST00000216490 618 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 AC158686.1-201ENSMUST00000218068 2332 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm42700-201ENSMUST00000199071 2437 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Gm16487-201ENSMUST00000105048 4037 ntBASIC11.17□□□□□ -0.62
Usp47Q8BY87 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp47Q8BY87 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm13552-201ENSMUST00000118837 417 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm15586-201ENSMUST00000121218 528 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm14053-201ENSMUST00000121662 470 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Mir3085-201ENSMUST00000175493 89 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Klra13-ps-203ENSMUST00000204367 850 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm37121-201ENSMUST00000192219 2556 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm24130-201ENSMUST00000158536 151 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm8164-201ENSMUST00000169120 1192 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm4259-201ENSMUST00000206489 758 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm45399-201ENSMUST00000209955 1016 ntBASIC11.16□□□□□ -0.62
Usp47Q8BY87 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp47Q8BY87 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 AC126251.1-201ENSMUST00000228170 2707 ntBASIC11.15□□□□□ -0.62
Usp47Q8BY87 Gm8428-201ENSMUST00000159919 1784 ntBASIC11.15□□□□□ -0.62
Usp47Q8BY87 Gm37806-201ENSMUST00000194524 6387 ntBASIC11.15□□□□□ -0.62
Usp47Q8BY87 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Usp47Q8BY87 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Usp47Q8BY87 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Usp47Q8BY87 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Usp47Q8BY87 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Usp47Q8BY87 Gm26182-201ENSMUST00000157688 116 ntBASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms