Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm14116-201ENSMUST00000117733 805 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm6987-201ENSMUST00000119319 428 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm11850-201ENSMUST00000119679 479 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm12140-201ENSMUST00000121214 544 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm5445-201ENSMUST00000180224 480 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Mir6971-201ENSMUST00000183497 63 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm412-201ENSMUST00000193360 948 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm37641-201ENSMUST00000193837 239 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm7804-202ENSMUST00000194187 854 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm9240-201ENSMUST00000206527 742 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Gm44571-201ENSMUST00000208092 533 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Gm19047-201ENSMUST00000220922 1099 ntBASIC10.32□□□□□ -0.76
Col18a1P39061 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col18a1P39061 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Col18a1P39061 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Col18a1P39061 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm12321-201ENSMUST00000121485 804 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm25556-201ENSMUST00000158077 144 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm8609-201ENSMUST00000182967 998 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28801-201ENSMUST00000188761 449 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm43689-201ENSMUST00000195951 427 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 AC117240.1-201ENSMUST00000199436 61 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm42760-201ENSMUST00000199814 311 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col18a1P39061 AC153847.1-201ENSMUST00000214524 353 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 CT025639.2-201ENSMUST00000224440 1220 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm5316-202ENSMUST00000185734 3096 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm43411-201ENSMUST00000196235 1579 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm45714-201ENSMUST00000211466 2722 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Gm42981-201ENSMUST00000200184 3252 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm10364-202ENSMUST00000153034 1001 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm28070-201ENSMUST00000191502 445 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC10.31□□□□□ -0.76
Col18a1P39061 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC10.31□□□□□ -0.76
Col18a1P39061 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 AC167013.4-201ENSMUST00000226712 317 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col18a1P39061 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm5454-201ENSMUST00000052030 1453 ntBASIC10.31□□□□□ -0.76
Col18a1P39061 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col18a1P39061 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC10.3□□□□□ -0.76
Col18a1P39061 Gm18830-201ENSMUST00000199036 1396 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Gm2136-201ENSMUST00000193945 2577 ntBASIC10.3□□□□□ -0.76
Col18a1P39061 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col18a1P39061 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Col18a1P39061 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms