Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Dhx30-203ENSMUST00000165596 3726 ntTSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm13526-201ENSMUST00000117970 189 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm11926-201ENSMUST00000118520 430 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm14631-201ENSMUST00000119067 594 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm5350-201ENSMUST00000182057 1002 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Mir6769b-201ENSMUST00000184793 60 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm27596-201ENSMUST00000185061 83 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm37024-201ENSMUST00000192224 868 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm5541-201ENSMUST00000193248 1113 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm37576-201ENSMUST00000194228 372 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm21048-201ENSMUST00000202470 1166 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm21089-201ENSMUST00000215843 325 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm45925-202ENSMUST00000219904 1136 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm17611-202ENSMUST00000220613 814 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 AC126805.1-201ENSMUST00000225142 262 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Rnasel-201ENSMUST00000086209 2938 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 AC156802.2-201ENSMUST00000225239 5740 ntBASIC10.1□□□□□ -0.79
RtcbQ99LF4 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm37315-201ENSMUST00000194347 3479 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm1866-201ENSMUST00000120701 477 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm22206-201ENSMUST00000158612 116 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm9141-201ENSMUST00000159355 1007 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm26413-201ENSMUST00000196783 126 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm3011-201ENSMUST00000215669 582 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm19007-201ENSMUST00000217746 874 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC155834.1-201ENSMUST00000220033 498 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC147245.1-201ENSMUST00000223294 677 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC137950.3-201ENSMUST00000228250 246 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Gm35608-201ENSMUST00000218472 2370 ntBASIC10.09□□□□□ -0.79
RtcbQ99LF4 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RtcbQ99LF4 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm37234-201ENSMUST00000193259 1441 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 AC160637.1-201ENSMUST00000214037 3887 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms