Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Gm3774-201ENSMUST00000209773 435 ntBASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 AC241621.1-201ENSMUST00000224499 430 ntBASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cchcr1Q8K2I2 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Cchcr1Q8K2I2 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm12460-201ENSMUST00000117147 357 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm13254-201ENSMUST00000118295 654 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm12875-201ENSMUST00000118745 344 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm14528-201ENSMUST00000120615 231 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm16103-201ENSMUST00000163003 1279 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm28193-201ENSMUST00000189863 615 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cchcr1Q8K2I2 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm24938-201ENSMUST00000102225 110 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm8510-201ENSMUST00000189202 895 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm18362-201ENSMUST00000221786 529 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Gm8623-201ENSMUST00000071573 436 ntBASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cchcr1Q8K2I2 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms