Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm11922-201ENSMUST00000118967 475 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm13921-201ENSMUST00000119411 463 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm11955-201ENSMUST00000119801 470 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm13586-201ENSMUST00000121784 464 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm26408-201ENSMUST00000157672 127 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm22424-201ENSMUST00000158527 87 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm43471-201ENSMUST00000197550 467 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm43840-201ENSMUST00000199444 484 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm8767-201ENSMUST00000215786 1070 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 AC124196.1-201ENSMUST00000225970 1032 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm38014-201ENSMUST00000193349 2612 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm371-201ENSMUST00000142240 1245 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm25266-201ENSMUST00000158521 304 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Mir8110-201ENSMUST00000183771 97 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Trav22-201ENSMUST00000198117 346 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm42489-201ENSMUST00000198964 669 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm44561-201ENSMUST00000208869 264 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm9354-201ENSMUST00000209075 468 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Olfr471-201ENSMUST00000210091 936 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Gm8107-201ENSMUST00000117477 2009 ntBASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccdc60Q8C4J0 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm12773-201ENSMUST00000120134 587 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Scarna17-201ENSMUST00000158064 79 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm7560-201ENSMUST00000187748 873 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 AC160635.1-201ENSMUST00000216731 474 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 AC122360.1-201ENSMUST00000217737 624 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm37978-201ENSMUST00000194736 2915 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Gm13081-201ENSMUST00000121527 5599 ntBASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccdc60Q8C4J0 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms