Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Polr2l-201ENSMUST00000043870 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Sox1P53783 Zfp62-203ENSMUST00000109198 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm37060-201ENSMUST00000194997 2397 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Mir503-201ENSMUST00000102168 71 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm25344-201ENSMUST00000104503 132 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm14388-201ENSMUST00000118119 477 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm13879-201ENSMUST00000118308 242 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm24241-201ENSMUST00000157787 145 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm17572-201ENSMUST00000171455 420 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Sox1P53783 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm4831-201ENSMUST00000174626 594 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.6□□□□□ -1.03
Sox1P53783 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm27927-201ENSMUST00000183791 126 ntBASIC8.6□□□□□ -1.03
Sox1P53783 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.6□□□□□ -1.03
Sox1P53783 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm2926-201ENSMUST00000205625 239 ntBASIC8.6□□□□□ -1.03
Sox1P53783 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm45827-201ENSMUST00000211955 311 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm8838-201ENSMUST00000212978 541 ntBASIC8.6□□□□□ -1.03
Sox1P53783 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.6□□□□□ -1.03
Sox1P53783 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.6□□□□□ -1.03
Sox1P53783 AC147628.1-201ENSMUST00000228193 688 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm15342-201ENSMUST00000146222 2100 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm37694-201ENSMUST00000191696 2133 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Sox1P53783 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm17816-201ENSMUST00000219991 2603 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Wdcp-206ENSMUST00000223551 4317 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Tspan7-201ENSMUST00000076354 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC8.6□□□□□ -1.03
Sox1P53783 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Plekhs1-202ENSMUST00000178590 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Plekhs1-201ENSMUST00000039666 2378 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Cabs1-201ENSMUST00000008051 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Gm11969-201ENSMUST00000118848 356 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm14855-201ENSMUST00000119925 192 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gm24782-201ENSMUST00000157641 132 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm23207-201ENSMUST00000158665 102 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm22642-201ENSMUST00000175352 252 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm6498-201ENSMUST00000181413 1006 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm27026-201ENSMUST00000183003 892 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Mir7046-201ENSMUST00000183435 66 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm27813-201ENSMUST00000184343 354 ntBASIC8.59□□□□□ -1.03
Sox1P53783 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Sox1P53783 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC8.59□□□□□ -1.03
Sox1P53783 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Sox1P53783 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC8.59□□□□□ -1.03
Sox1P53783 AC134607.2-201ENSMUST00000213983 231 ntBASIC8.59□□□□□ -1.03
Sox1P53783 Gm3011-201ENSMUST00000215669 582 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms