Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC10.35□□□□□ -0.75
Col18a1P39061 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC10.35□□□□□ -0.75
Col18a1P39061 Gm9027-201ENSMUST00000165914 661 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Gm27186-201ENSMUST00000184223 307 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Col18a1P39061 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Mir3068-201ENSMUST00000083004 136 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC10.35□□□□□ -0.75
Col18a1P39061 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Col18a1P39061 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 AC154634.1-201ENSMUST00000225225 2394 ntBASIC10.35□□□□□ -0.75
Col18a1P39061 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Col18a1P39061 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col18a1P39061 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm11320-201ENSMUST00000119434 463 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Gm17022-201ENSMUST00000166415 922 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Gm4202-201ENSMUST00000169025 733 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC10.34□□□□□ -0.75
Col18a1P39061 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm5244-202ENSMUST00000189517 743 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Ighv1-83-201ENSMUST00000199643 351 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col18a1P39061 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm4927-201ENSMUST00000219548 1318 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col18a1P39061 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm26183-201ENSMUST00000157685 139 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Gm3208-201ENSMUST00000168281 427 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 n-R5s217-201ENSMUST00000083341 116 ntBASIC10.34□□□□□ -0.75
Col18a1P39061 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col18a1P39061 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Col18a1P39061 Ehmt1-201ENSMUST00000046227 4554 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Col18a1P39061 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col18a1P39061 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.75
Col18a1P39061 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 AC132465.1-201ENSMUST00000219938 1307 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Col18a1P39061 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Col18a1P39061 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.33□□□□□ -0.76
Col18a1P39061 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Col18a1P39061 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Gm44531-201ENSMUST00000208364 2000 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm18537-202ENSMUST00000206215 1503 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm22707-201ENSMUST00000103834 110 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm26169-201ENSMUST00000158420 135 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm4860-201ENSMUST00000200368 454 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 AC152922.1-201ENSMUST00000216518 1232 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
Col18a1P39061 Gm8464-201ENSMUST00000140208 2200 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm4750-202ENSMUST00000152262 2200 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col18a1P39061 Gm42897-201ENSMUST00000201486 2112 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Gm42648-201ENSMUST00000200774 2505 ntBASIC10.33□□□□□ -0.76
Col18a1P39061 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Col18a1P39061 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col18a1P39061 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms