Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm371-201ENSMUST00000142240 1245 ntBASIC9.3□□□□□ -0.92
Col1a1P11087 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Col1a1P11087 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.3□□□□□ -0.92
Col1a1P11087 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm9127-201ENSMUST00000188041 985 ntBASIC9.3□□□□□ -0.92
Col1a1P11087 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Col1a1P11087 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col1a1P11087 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC9.29□□□□□ -0.92
Col1a1P11087 Gm5135-201ENSMUST00000121100 573 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Gm15362-201ENSMUST00000121459 388 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 AC124572.1-201ENSMUST00000218155 2406 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col1a1P11087 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.29□□□□□ -0.92
Col1a1P11087 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm7651-201ENSMUST00000173398 901 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm7436-201ENSMUST00000187229 391 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm7419-201ENSMUST00000209962 925 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Gm8275-201ENSMUST00000219732 424 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 AC131117.2-202ENSMUST00000224539 547 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC9.28□□□□□ -0.92
Col1a1P11087 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col1a1P11087 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm44895-201ENSMUST00000206670 1538 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Gm42895-201ENSMUST00000200761 2996 ntBASIC9.28□□□□□ -0.92
Col1a1P11087 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col1a1P11087 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms