Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mir8099-2-201ENSMUST00000183568 127 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Mir8099-1-201ENSMUST00000184238 127 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Ighv1-30-201ENSMUST00000194082 349 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Gm43243-201ENSMUST00000199964 278 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Gm43657-201ENSMUST00000200336 3833 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 AC129537.1-202ENSMUST00000226619 430 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Vmn1r41-204ENSMUST00000227039 985 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 CU024890.1-201ENSMUST00000221361 2019 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC10.12□□□□□ -0.79
RtcbQ99LF4 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RtcbQ99LF4 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm43457-201ENSMUST00000200867 2409 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm42435-201ENSMUST00000196630 1448 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm25396-201ENSMUST00000103981 133 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm22022-201ENSMUST00000104355 127 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm12202-201ENSMUST00000121196 811 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm12517-201ENSMUST00000122082 425 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm12967-201ENSMUST00000122147 289 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm22094-201ENSMUST00000158976 117 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm5327-201ENSMUST00000182864 1009 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm27595-201ENSMUST00000184579 112 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm18254-201ENSMUST00000185699 1204 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm17530-201ENSMUST00000194336 472 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm34165-201ENSMUST00000222012 1174 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 AC139209.2-201ENSMUST00000227680 1208 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm9848-201ENSMUST00000053398 259 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 AC153940.1-201ENSMUST00000220149 5300 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 CT009530.1-201ENSMUST00000227348 2927 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gm43336-201ENSMUST00000200487 4504 ntBASIC10.11□□□□□ -0.79
RtcbQ99LF4 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RtcbQ99LF4 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Nek11-201ENSMUST00000038648 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RtcbQ99LF4 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms