Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc88cQ6VGS5 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Ccdc88cQ6VGS5 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc88cQ6VGS5 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc88cQ6VGS5 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm15192-201ENSMUST00000121005 293 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm29145-201ENSMUST00000189914 456 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm4545-201ENSMUST00000190797 603 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm5307-201ENSMUST00000204772 760 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm37962-201ENSMUST00000195535 2034 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm23392-201ENSMUST00000157580 113 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc88cQ6VGS5 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm22022-201ENSMUST00000104355 127 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm13988-201ENSMUST00000119363 288 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm18503-201ENSMUST00000220340 728 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm13495-201ENSMUST00000121156 537 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Scarna17-201ENSMUST00000158064 79 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm7502-201ENSMUST00000169235 733 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm8921-201ENSMUST00000204306 649 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc88cQ6VGS5 Gm9801-201ENSMUST00000054860 408 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms