Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC154603.2-201ENSMUST00000223896 577 ntBASIC6.88□□□□□ -1.31
Rif1Q6PR54 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.88□□□□□ -1.31
Rif1Q6PR54 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Rif1Q6PR54 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rif1Q6PR54 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rif1Q6PR54 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rif1Q6PR54 CT009713.5-203ENSMUST00000224218 2079 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC160118.1-201ENSMUST00000214497 2457 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm38336-201ENSMUST00000193040 2549 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm14279-201ENSMUST00000117142 332 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm14481-201ENSMUST00000117178 629 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm10243-201ENSMUST00000117571 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm13176-201ENSMUST00000117910 477 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm11810-201ENSMUST00000118311 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm15007-201ENSMUST00000119982 710 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm7700-201ENSMUST00000120273 970 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm11370-201ENSMUST00000120583 260 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm27030-201ENSMUST00000182551 464 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Mir6340-201ENSMUST00000183857 119 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm45626-201ENSMUST00000210093 361 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm10247-201ENSMUST00000090395 333 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm37066-201ENSMUST00000192713 2061 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC126804.1-201ENSMUST00000216609 2079 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm17382-201ENSMUST00000108741 1514 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC164625.1-201ENSMUST00000214034 3036 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm14580-201ENSMUST00000119122 718 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm7494-201ENSMUST00000121248 441 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm15618-201ENSMUST00000121610 452 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm17195-201ENSMUST00000170289 428 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Olfr1239-201ENSMUST00000099780 918 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 AC133934.1-201ENSMUST00000223052 1761 ntBASIC6.87□□□□□ -1.31
Rif1Q6PR54 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Ankrd6-205ENSMUST00000108166 2321 ntTSL 5 BASIC6.87□□□□□ -1.31
Rif1Q6PR54 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rif1Q6PR54 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rif1Q6PR54 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms