Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Vps54Q5SPW0 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Vps54Q5SPW0 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Vps54Q5SPW0 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Vps54Q5SPW0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm11907-201ENSMUST00000118918 1007 ntBASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm5251-201ENSMUST00000188959 472 ntBASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm36996-201ENSMUST00000194466 250 ntBASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm43471-201ENSMUST00000197550 467 ntBASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Trav22-201ENSMUST00000198117 346 ntBASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Vps54Q5SPW0 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm37968-201ENSMUST00000195131 3201 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm26014-201ENSMUST00000104405 132 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm11922-201ENSMUST00000118967 475 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm15572-201ENSMUST00000119248 593 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm15836-201ENSMUST00000119952 793 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm4773-201ENSMUST00000120392 702 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm10086-201ENSMUST00000136334 354 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Mir6940-201ENSMUST00000183447 70 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm28728-201ENSMUST00000189087 405 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm18243-201ENSMUST00000220756 887 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC124715.2-201ENSMUST00000226762 617 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC107452.2-201ENSMUST00000228415 363 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC131586.4-201ENSMUST00000228424 668 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr120-201ENSMUST00000077498 993 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm7493-201ENSMUST00000085919 626 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Gm8836-201ENSMUST00000198196 1348 ntBASIC9.55□□□□□ -0.88
Vps54Q5SPW0 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Vps54Q5SPW0 Gm42811-201ENSMUST00000201951 2768 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms