Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29799-201ENSMUST00000204061 487 ntBASIC8.62□□□□□ -1.03
Sox1P53783 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.62□□□□□ -1.03
Sox1P53783 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.62□□□□□ -1.03
Sox1P53783 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm25704-201ENSMUST00000083116 168 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Vmn1r209-201ENSMUST00000095961 939 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm17382-201ENSMUST00000108741 1514 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Mrps31-201ENSMUST00000033934 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Thrap3-203ENSMUST00000106142 2744 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 A930005G22Rik-201ENSMUST00000201293 1904 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 Pcdh15-210ENSMUST00000125517 3074 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Spn-201ENSMUST00000049931 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 1600029O15Rik-202ENSMUST00000179787 1809 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Sox1P53783 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Pgk2-201ENSMUST00000033585 1592 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Sox1P53783 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Hdlbp-201ENSMUST00000042498 4427 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Smok3b-202ENSMUST00000166206 2160 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm12365-201ENSMUST00000117931 568 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm14943-201ENSMUST00000118056 546 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm14036-201ENSMUST00000118248 480 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm14599-201ENSMUST00000120469 474 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm21990-201ENSMUST00000124692 383 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm22587-201ENSMUST00000157511 298 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm8919-201ENSMUST00000182028 1014 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm28060-201ENSMUST00000191554 189 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC8.61□□□□□ -1.03
Sox1P53783 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC8.61□□□□□ -1.03
Sox1P53783 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC8.61□□□□□ -1.03
Sox1P53783 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Gm9652-201ENSMUST00000209345 163 ntBASIC8.61□□□□□ -1.03
Sox1P53783 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Diaph3-204ENSMUST00000226254 682 ntBASIC8.61□□□□□ -1.03
Sox1P53783 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Spink4-201ENSMUST00000030122 397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm6887-201ENSMUST00000080945 482 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Olfr572-201ENSMUST00000098214 957 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Sox1P53783 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Ankrd6-205ENSMUST00000108166 2321 ntTSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Stam2-201ENSMUST00000102759 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Aasdh-202ENSMUST00000120963 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Dgat2l6-201ENSMUST00000037541 1640 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC8.61□□□□□ -1.03
Sox1P53783 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Gm15708-201ENSMUST00000156467 1765 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Sox1P53783 Cbx3-203ENSMUST00000114445 1585 ntTSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Gm8634-201ENSMUST00000222547 1367 ntBASIC8.61□□□□□ -1.03
Sox1P53783 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC8.61□□□□□ -1.03
Sox1P53783 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Erg-204ENSMUST00000118113 3062 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm42868-201ENSMUST00000199168 2697 ntBASIC8.6□□□□□ -1.03
Sox1P53783 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Sox1P53783 Zcchc12-201ENSMUST00000048067 2089 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Sox1P53783 Gm38272-201ENSMUST00000194431 2400 ntBASIC8.6□□□□□ -1.03
Sox1P53783 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms