Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC139323.1-201ENSMUST00000223370 1040 ntBASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 AC154747.4-201ENSMUST00000224802 903 ntBASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Gm43292-201ENSMUST00000199580 2449 ntBASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Gm44509-201ENSMUST00000205400 1324 ntBASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc180J3QNE4 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm35808-201ENSMUST00000204769 2602 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm15129-201ENSMUST00000119673 279 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm22035-201ENSMUST00000157284 228 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm6522-201ENSMUST00000197160 1203 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Gm44147-201ENSMUST00000204658 94 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 AC155834.1-201ENSMUST00000220033 498 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Diaph3-204ENSMUST00000226254 682 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 AC106830.2-201ENSMUST00000226624 943 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Dennd6a-205ENSMUST00000224378 2424 ntBASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc180J3QNE4 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm4919-201ENSMUST00000117825 604 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm12851-201ENSMUST00000117920 421 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm13744-201ENSMUST00000118953 850 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm24139-201ENSMUST00000122780 288 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Gm23533-201ENSMUST00000157540 245 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 AC166822.1-201ENSMUST00000227667 636 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC14.46□□□□□ -0.1
Ccdc180J3QNE4 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Gm11653-201ENSMUST00000119992 1009 ntBASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Gm42907-201ENSMUST00000199793 2148 ntBASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc180J3QNE4 AC131743.4-201ENSMUST00000221638 1553 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 AC124572.1-201ENSMUST00000218155 2406 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 AC159379.2-201ENSMUST00000220244 2482 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm35172-201ENSMUST00000196037 2649 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm27185-201ENSMUST00000184296 247 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm19764-201ENSMUST00000203630 649 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 AC124397.1-201ENSMUST00000224296 653 ntBASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc180J3QNE4 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc180J3QNE4 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc180J3QNE4 Gm45534-201ENSMUST00000211449 2339 ntBASIC14.43□□□□□ -0.1
Ccdc180J3QNE4 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms