Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm5981-201ENSMUST00000199912 487 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC6.83□□□□□ -1.32
Tram1Q91V04 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 AC126805.1-201ENSMUST00000225142 262 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm24145-201ENSMUST00000082631 163 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Tmem209-201ENSMUST00000064330 1679 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 AC156790.4-202ENSMUST00000228838 1418 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Tram1Q91V04 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Tram1Q91V04 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.83□□□□□ -1.32
Tram1Q91V04 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Tram1Q91V04 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm23127-201ENSMUST00000104261 130 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm15702-201ENSMUST00000119680 444 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.82□□□□□ -1.32
Tram1Q91V04 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm23479-201ENSMUST00000158876 122 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm17147-201ENSMUST00000164176 432 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm37282-201ENSMUST00000191987 164 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm37665-201ENSMUST00000192353 149 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm43835-201ENSMUST00000195932 149 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm43535-201ENSMUST00000197846 164 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Trav11n-201ENSMUST00000200113 343 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm44379-201ENSMUST00000204501 164 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm44268-201ENSMUST00000204814 164 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm45900-201ENSMUST00000211879 409 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 AC137117.2-201ENSMUST00000228560 282 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm23458-201ENSMUST00000083257 169 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Grik1-210ENSMUST00000228034 2708 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.82□□□□□ -1.32
Tram1Q91V04 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Tram1Q91V04 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms