Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Sf3a1Q8K4Z5 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sf3a1Q8K4Z5 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sf3a1Q8K4Z5 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Sf3a1Q8K4Z5 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.87□□□□□ -0.83
Sf3a1Q8K4Z5 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm11997-201ENSMUST00000118697 313 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm13651-201ENSMUST00000119086 1110 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm24307-201ENSMUST00000178512 101 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 AC154738.3-201ENSMUST00000227953 409 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Zfp939-201ENSMUST00000061201 2131 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sf3a1Q8K4Z5 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm44746-201ENSMUST00000205565 1349 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm16409-201ENSMUST00000100510 747 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm24257-201ENSMUST00000104472 131 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm9143-201ENSMUST00000120745 745 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm8172-201ENSMUST00000120762 750 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm18024-201ENSMUST00000218516 690 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 AC165260.5-201ENSMUST00000224640 1247 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Ermard-209ENSMUST00000226561 1019 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sf3a1Q8K4Z5 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 AC112680.1-201ENSMUST00000215435 1349 ntBASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sf3a1Q8K4Z5 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms