Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Col18a1P39061 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Col18a1P39061 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm35048-201ENSMUST00000192105 2802 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Col18a1P39061 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm5843-201ENSMUST00000121631 476 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Gm43595-201ENSMUST00000196464 1071 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 CT010480.3-201ENSMUST00000224712 259 ntBASIC10.39□□□□□ -0.75
Col18a1P39061 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Col18a1P39061 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Col18a1P39061 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Col18a1P39061 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Col18a1P39061 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm26831-201ENSMUST00000181458 1380 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Col18a1P39061 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm25509-201ENSMUST00000116985 106 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm6654-201ENSMUST00000118950 348 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm11416-201ENSMUST00000119111 863 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm15081-201ENSMUST00000119794 844 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm11341-201ENSMUST00000122316 447 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC10.38□□□□□ -0.75
Col18a1P39061 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm37189-201ENSMUST00000192131 298 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm5791-201ENSMUST00000220840 489 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Col18a1P39061 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Col18a1P39061 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm42822-201ENSMUST00000200507 1529 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.38□□□□□ -0.75
Col18a1P39061 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Col18a1P39061 Gm10307-201ENSMUST00000189839 1337 ntBASIC10.38□□□□□ -0.75
Col18a1P39061 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Col18a1P39061 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Col18a1P39061 Gm15578-201ENSMUST00000117320 475 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Gm14200-201ENSMUST00000122256 192 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Gm16284-201ENSMUST00000140995 400 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Gm5261-201ENSMUST00000185860 713 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC10.37□□□□□ -0.75
Col18a1P39061 Gm28980-201ENSMUST00000187877 219 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 Gm34701-201ENSMUST00000204213 849 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC10.37□□□□□ -0.75
Col18a1P39061 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC10.37□□□□□ -0.75
Col18a1P39061 AC140209.1-201ENSMUST00000227875 284 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Gm23734-201ENSMUST00000083753 109 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Col18a1P39061 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC10.37□□□□□ -0.75
Col18a1P39061 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms