Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Atf6F6VAN0 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Atf6F6VAN0 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Atf6F6VAN0 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Atf6F6VAN0 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atf6F6VAN0 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.63□□□□□ -1.03
Atf6F6VAN0 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm15754-201ENSMUST00000119191 478 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm11850-201ENSMUST00000119679 479 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm6806-201ENSMUST00000120092 1006 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm5389-201ENSMUST00000120893 1176 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm8540-201ENSMUST00000168952 732 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm8604-201ENSMUST00000183150 965 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm28478-201ENSMUST00000185802 183 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm31123-201ENSMUST00000192094 666 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm17978-201ENSMUST00000195986 769 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm5307-201ENSMUST00000204772 760 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm6375-201ENSMUST00000205201 1145 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 AC154603.2-201ENSMUST00000223896 577 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 n-R5s74-201ENSMUST00000082654 116 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.62□□□□□ -1.03
Atf6F6VAN0 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Atf6F6VAN0 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm23835-201ENSMUST00000104439 132 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm14336-201ENSMUST00000117491 475 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm11320-201ENSMUST00000119434 463 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm11897-201ENSMUST00000121976 828 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 n-R5s43-201ENSMUST00000122739 110 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm16129-201ENSMUST00000152628 486 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm6542-201ENSMUST00000153606 772 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 Gm23777-201ENSMUST00000158994 259 ntBASIC8.61□□□□□ -1.03
Atf6F6VAN0 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms