Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC10.16□□□□□ -0.78
RtcbQ99LF4 AC154838.3-201ENSMUST00000228876 965 ntBASIC10.16□□□□□ -0.78
RtcbQ99LF4 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm43420-201ENSMUST00000198012 1857 ntBASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RtcbQ99LF4 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm3742-201ENSMUST00000220907 1391 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm6823-201ENSMUST00000120791 1839 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm24462-201ENSMUST00000102430 106 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm12687-201ENSMUST00000119752 706 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm15153-201ENSMUST00000119867 274 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm15719-201ENSMUST00000120619 635 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm12400-201ENSMUST00000120915 1003 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm12642-201ENSMUST00000121098 876 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm16112-201ENSMUST00000159075 382 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm27866-201ENSMUST00000184459 171 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm29577-201ENSMUST00000186427 693 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm19030-201ENSMUST00000194947 552 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm36932-201ENSMUST00000195226 929 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm44147-201ENSMUST00000204658 94 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 AC151982.1-201ENSMUST00000223546 464 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Mir185-201ENSMUST00000083530 65 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Gm16465-201ENSMUST00000118585 1758 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 AC164437.4-204ENSMUST00000227169 4024 ntBASIC10.15□□□□□ -0.78
RtcbQ99LF4 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RtcbQ99LF4 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.79
RtcbQ99LF4 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 AC117656.3-203ENSMUST00000225007 1809 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm37039-201ENSMUST00000193733 2485 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm13739-201ENSMUST00000118020 530 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm13858-201ENSMUST00000118862 671 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm22224-201ENSMUST00000157357 93 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Scarna17-201ENSMUST00000158064 79 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm23639-201ENSMUST00000175078 132 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm28187-201ENSMUST00000186885 2134 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm8641-201ENSMUST00000186995 826 ntBASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC10.14□□□□□ -0.79
RtcbQ99LF4 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms