Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Trav22-201ENSMUST00000198117 346 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm7478-201ENSMUST00000201054 581 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC166358.1-201ENSMUST00000220677 105 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC153662.2-201ENSMUST00000221097 120 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC156037.2-201ENSMUST00000221284 112 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC166341.6-201ENSMUST00000221528 105 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 CT030242.1-201ENSMUST00000221945 125 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC124772.2-201ENSMUST00000222049 154 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC153663.1-201ENSMUST00000222165 120 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 CT030157.1-201ENSMUST00000222355 148 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC150661.2-201ENSMUST00000222418 105 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 AC127242.2-201ENSMUST00000223138 148 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 CT009530.1-201ENSMUST00000227348 2927 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm5530-201ENSMUST00000117185 985 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm13674-201ENSMUST00000121276 823 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm42977-201ENSMUST00000197497 144 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm8767-201ENSMUST00000215786 1070 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Rpl32l-201ENSMUST00000216127 399 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Mir486-201ENSMUST00000093576 128 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm44014-201ENSMUST00000205150 1509 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm37675-201ENSMUST00000192303 2847 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm44610-201ENSMUST00000209012 3827 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 AC154347.1-201ENSMUST00000221358 3105 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 AC099612.1-201ENSMUST00000226318 1636 ntBASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup88Q8CEC0 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm4773-201ENSMUST00000120392 702 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Defa-ps10-201ENSMUST00000121649 171 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 1017.1 ms