Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11689-201ENSMUST00000120766 302 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm3611-201ENSMUST00000173687 877 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm22408-201ENSMUST00000174925 65 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm28164-201ENSMUST00000190143 442 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Trav22-201ENSMUST00000198117 346 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Gm43558-201ENSMUST00000200155 210 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm46317-201ENSMUST00000221103 393 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 AC133598.3-204ENSMUST00000224260 767 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 AC154747.4-201ENSMUST00000224802 903 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 AC154461.4-201ENSMUST00000224878 468 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 CT030705.2-201ENSMUST00000225301 556 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Col1a1P11087 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Col1a1P11087 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col1a1P11087 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Col1a1P11087 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.36□□□□□ -0.91
Col1a1P11087 Gm17821-201ENSMUST00000223448 1693 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Gm12834-201ENSMUST00000121855 2829 ntBASIC9.36□□□□□ -0.91
Col1a1P11087 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Col1a1P11087 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col1a1P11087 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Gm13552-201ENSMUST00000118837 417 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Gm27026-201ENSMUST00000183003 892 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC9.35□□□□□ -0.91
Col1a1P11087 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.35□□□□□ -0.91
Col1a1P11087 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.35□□□□□ -0.91
Col1a1P11087 Gm9652-201ENSMUST00000209345 163 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Gm9249-201ENSMUST00000221420 578 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 AC140451.1-201ENSMUST00000227984 737 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col1a1P11087 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Col1a1P11087 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col1a1P11087 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Col1a1P11087 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 AC160340.1-201ENSMUST00000222952 3964 ntBASIC9.35□□□□□ -0.91
Col1a1P11087 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col1a1P11087 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col1a1P11087 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col1a1P11087 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col1a1P11087 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm11653-201ENSMUST00000119992 1009 ntBASIC9.34□□□□□ -0.91
Col1a1P11087 Gm7746-201ENSMUST00000120966 503 ntBASIC9.34□□□□□ -0.91
Col1a1P11087 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col1a1P11087 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.34□□□□□ -0.91
Col1a1P11087 Mir6340-201ENSMUST00000183857 119 ntBASIC9.34□□□□□ -0.91
Col1a1P11087 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col1a1P11087 Gm44044-201ENSMUST00000205178 1089 ntBASIC9.34□□□□□ -0.91
Col1a1P11087 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms