Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc180J3QNE4 Tnpo3-202ENSMUST00000115251 3989 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc180J3QNE4 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 AC122346.2-201ENSMUST00000224326 2931 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm22470-201ENSMUST00000104117 130 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm12331-201ENSMUST00000119927 622 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm4796-201ENSMUST00000219802 624 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm40853-201ENSMUST00000221342 582 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm9255-201ENSMUST00000223225 581 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 AC117949.1-201ENSMUST00000225547 419 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 AC154361.1-201ENSMUST00000225694 745 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 AC161537.1-202ENSMUST00000228450 868 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Mir455-201ENSMUST00000093594 82 ntBASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc180J3QNE4 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm37618-201ENSMUST00000192891 3075 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm14480-201ENSMUST00000118521 433 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm4918-201ENSMUST00000119420 1084 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm15842-201ENSMUST00000120513 618 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 AC165287.1-201ENSMUST00000224985 178 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm6419-201ENSMUST00000097166 429 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Gm45201-201ENSMUST00000207187 2679 ntBASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccdc180J3QNE4 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Gm28580-201ENSMUST00000186767 88 ntBASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Gm37225-201ENSMUST00000193423 325 ntBASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc180J3QNE4 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm43544-201ENSMUST00000196474 2472 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm11945-201ENSMUST00000120551 476 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm13877-201ENSMUST00000120614 417 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Gm7436-201ENSMUST00000187229 391 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 AC162176.1-201ENSMUST00000216490 618 ntBASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc180J3QNE4 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms