Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC133183.2-201ENSMUST00000221543 280 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC163660.3-202ENSMUST00000224917 464 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 CT030646.1-201ENSMUST00000225049 980 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC126691.2-201ENSMUST00000226185 249 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC163295.2-202ENSMUST00000227763 1053 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm6083-201ENSMUST00000075518 357 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC164437.4-204ENSMUST00000227169 4024 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm12187-201ENSMUST00000119584 1375 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm6275-201ENSMUST00000118971 1122 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm13683-201ENSMUST00000119497 1076 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm25837-201ENSMUST00000158919 108 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm37282-201ENSMUST00000191987 164 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm37665-201ENSMUST00000192353 149 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm37371-201ENSMUST00000194837 392 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm43835-201ENSMUST00000195932 149 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm43535-201ENSMUST00000197846 164 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm42472-201ENSMUST00000201626 859 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm44018-201ENSMUST00000204471 407 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm44379-201ENSMUST00000204501 164 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm44268-201ENSMUST00000204814 164 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm4270-201ENSMUST00000209666 406 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm8838-201ENSMUST00000212978 541 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 AC154843.1-201ENSMUST00000226897 1138 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 AC107711.5-201ENSMUST00000228149 594 ntBASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Ftsj1-203ENSMUST00000115595 1656 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup88Q8CEC0 Gm9105-201ENSMUST00000120160 1398 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm15154-201ENSMUST00000117590 366 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm13325-201ENSMUST00000118746 806 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm14186-201ENSMUST00000120804 137 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm11897-201ENSMUST00000121976 828 ntBASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup88Q8CEC0 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms