Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
H2afb3S4R1G7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
H2afb3S4R1G7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
H2afb3S4R1G7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.83■□□□□ 0.29
H2afb3S4R1G7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Gm21956-201ENSMUST00000179946 522 ntBASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.83■□□□□ 0.28
H2afb3S4R1G7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Gm12821-201ENSMUST00000120022 600 ntBASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Smad6-203ENSMUST00000179458 273 ntBASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb3S4R1G7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb3S4R1G7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Gm8493-201ENSMUST00000196881 489 ntBASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb3S4R1G7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb3S4R1G7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb3S4R1G7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms