Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl40Q9Z2Q5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl40Q9Z2Q5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl40Q9Z2Q5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl40Q9Z2Q5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl40Q9Z2Q5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 AA386476-201ENSMUST00000098781 1665 ntBASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl40Q9Z2Q5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms